The European Physical Journal Plus

Volume 129 / No 6 (June 2014)

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Focus Point on Pattern Recognition Tools for Proteomics

Annotation and retrieval in protein interaction databases 135

Mario Cannataro, Pietro Hiram Guzzi and Pierangelo Veltri

Published online: 24 June 2014

DOI: 10.1140/epjp/i2014-14135-x

On the integration of protein-protein interaction networks with gene expression and 3D structural data: What can be gained? 134

Paola Bertolazzi, Mary Ellen Bock, Concettina Guerra, Paola Paci and Daniele Santoni

Published online: 24 June 2014

DOI: 10.1140/epjp/i2014-14134-y

Structural representation of data structures 133

Virginio Cantoni, Alessandro Gaggia, Riccardo Gatti and Luca Lombardi

Published online: 24 June 2014

DOI: 10.1140/epjp/i2014-14133-0

Predicting protein-ligand and protein-peptide interfaces 132

Paola Bertolazzi, Concettina Guerra and Giampaolo Liuzzi

Published online: 24 June 2014

DOI: 10.1140/epjp/i2014-14132-1

Motifs and structural blocks retrieval by GHT 131

Virginio Cantoni, Alessio Ferone, Alfredo Petrosino and Ozlem Polat

Published online: 24 June 2014

DOI: 10.1140/epjp/i2014-14131-2

Open Access

Editorial

Pattern recognition tools for proteomics 130

Virginio Cantoni

Published online: 24 June 2014

DOI: 10.1140/epjp/i2014-14130-3

Focus Point on Quantum information and complexity

Two notes on Grover’s search: Programming and discriminating 128

Daniel Reitzner and Mário Ziman

Published online: 23 June 2014

DOI: 10.1140/epjp/i2014-14128-9

Focus Point on Quantum Spintronics and Related Phenomena

Spin-dependent recombination and single charge dynamics in silicon nanostructrures 121

D. Rotta, A. Vellei, G. Mazzeo, M. Belli, S. Cocco, M. L. V. Tagliaferri, A. Crippa, E. Prati and M. Fanciulli

Published online: 17 June 2014

DOI: 10.1140/epjp/i2014-14121-4

Hot electron spin diffusion in n-type GaAs 118

T. Henn, J.-H. Quast, M. Beck, T. Kiessling, W. Ossau and L. W. Molenkamp

Published online: 13 June 2014

DOI: 10.1140/epjp/i2014-14118-y

Open Access

Erratum

Erratum to: Application of USDA and SDBA Hamiltonians in calculating the excited states of odd-A magnesium isotopes 140

Anwer A. Al-Sammarrae, Fadhil I. Sharrad, A. A. Aziz, Norhasliza Yusof and Hasan Abu Kassim

Published online: 30 June 2014

DOI: 10.1140/epjp/i2014-14140-1

Superstring symmetries and space-time dimensionality 139

M. D. Pollock

Published online: 27 June 2014

DOI: 10.1140/epjp/i2014-14139-6

A theoretical study of energy spectra and two-neutron separation energies of ^106–122Cd isotopes in the transitional region of IBM 138

H. Sabri

Published online: 26 June 2014

DOI: 10.1140/epjp/i2014-14138-7

Conformal invariant teleparallel cosmology 137

Davood Momeni and Ratbay Myrzakulov

Published online: 26 June 2014

DOI: 10.1140/epjp/i2014-14137-8

Envelope periodic solutions for a discrete network with the Jacobi elliptic functions and the alternative (G′/G)-expansion method including the generalized Riccati equation 136

E. Tala-Tebue, D. C. Tsobgni-Fozap, A. Kenfack-Jiotsa and T. C. Kofane

Published online: 26 June 2014

DOI: 10.1140/epjp/i2014-14136-9

Quantum dynamics of a kicked system with position-dependent effective mass 129

M. Vubangsi, M. Tchoffo and L. C. Fai

Published online: 24 June 2014

DOI: 10.1140/epjp/i2014-14129-8

Unusual ferromagnetism in Ising and Potts model on semi-directed Barabási-Albert networks 127

Muneer A. Sumour and F. W. S. Lima

Published online: 23 June 2014

DOI: 10.1140/epjp/i2014-14127-x

A note on the Sagnac effect and current terrestrial experiments 126

Matteo Luca Ruggiero and Angelo Tartaglia

Published online: 23 June 2014

DOI: 10.1140/epjp/i2014-14126-y

Application of USDA and SDBA Hamiltonians in calculating the excited states of odd-A magnesium isotopes 125

Anwer A. Al-Sammarrae, Fadhil I. Sharrad, A. A. Aziz, Norhasliza Yusof and Hasan Abu Kassim

Published online: 23 June 2014

DOI: 10.1140/epjp/i2014-14125-0

GUE-type energy level statistics for spherical odd-mass nuclei 124

H. Sabri

Published online: 23 June 2014

DOI: 10.1140/epjp/i2014-14124-1

Peristaltic impulsion of MHD biviscosity fluid in a lopsided channel: Closed-form solution 123

Noreen Sher Akbar, Z. H. Khan and S. Nadeem

Published online: 20 June 2014

DOI: 10.1140/epjp/i2014-14123-2

Cosmological models with strange quark matter attached to string cloud in GR and Brans-Dicke theory of gravitation 122

V. U. M. Rao and D. Neelima

Published online: 19 June 2014

DOI: 10.1140/epjp/i2014-14122-3

A note on the exact temperatures of free two-dimensional and circular jets 120

Mustafa Turkyilmazoglu

Published online: 17 June 2014

DOI: 10.1140/epjp/i2014-14120-5

Interaction between modified Chaplygin gas and ghost dark energy in the presence of extra dimensions 119

M. Khurshudyan, J. Sadeghi, M. Hakobyan, H. Farahani and R. Myrzakulov

Published online: 17 June 2014

DOI: 10.1140/epjp/i2014-14119-x

The effect of nitrogen ion implantation on the corrosion resistance and microstructure of tantalum-coated stainless steel 117

S. Eshghi, M. Hanteh Zadeh, M. Yari and E. Jafari-Khamse

Published online: 13 June 2014

DOI: 10.1140/epjp/i2014-14117-0

Determination of the complex refractive index of cell cultures by reflectance spectrometry 116

Mihaela Antonina Calin, Marian Romeo Calin and Constantin Munteanu

Published online: 12 June 2014

DOI: 10.1140/epjp/i2014-14116-1

Classical light sources with tunable temporal coherence and tailored photon number distributions 115

Deepak Pandey, Nandan Satapathy, Buti Suryabrahmam, J. Solomon Ivan and Hema Ramachandran

Published online: 12 June 2014

DOI: 10.1140/epjp/i2014-14115-2

Open Access

Equivalence between free quantum particles and those in harmonic potentials and its application to instantaneous changes 114

Ole Steuernagel

Published online: 11 June 2014

DOI: 10.1140/epjp/i2014-14114-3

Generalized Jaynes-Cummings model in master function and supersymmetric representations 113

H. Panahi, L. Jahangiri and S. Asghari Rad

Published online: 10 June 2014

DOI: 10.1140/epjp/i2014-14113-4

Nucleon elastic scattering in quark-diquark representation with springy Pomeron 112

V. M. Grichine

Published online: 09 June 2014

DOI: 10.1140/epjp/i2014-14112-5

On the origins and the historical roots of the Higgs boson research from a bibliometric perspective 111

A. Barth, W. Marx, L. Bornmann and R. Mutz

Published online: 06 June 2014

DOI: 10.1140/epjp/i2014-14111-6

Quantum superintegrable systems with arbitrary spin: Exact solution with deformed oscillator formalism 110

Z. Alizadeh and H. Panahi

Published online: 06 June 2014

DOI: 10.1140/epjp/i2014-14110-7

On exact minimization of Higgs potentials 109

Markos Maniatis and Dhagash Mehta

Published online: 03 June 2014

DOI: 10.1140/epjp/i2014-14109-0

A confining model for charmonium and new gauge-invariant field equations 108

Jong-Ping Hsu

Published online: 03 June 2014

DOI: 10.1140/epjp/i2014-14108-1

Nonlinear peristaltic flow of a Carreau fluid in the presence of Hall current and convective effect 107

T. Hayat, Maryam Iqbal, Humaira Yasmin, Fuad Alsaadi and Naif Alotaibi

Published online: 03 June 2014

DOI: 10.1140/epjp/i2014-14107-2

Stability and bifurcation of the Tsodyks-Markram model about short-term synaptic plasticity with time delay 106

Qiubao Wang

Published online: 02 June 2014

DOI: 10.1140/epjp/i2014-14106-3

New kinetic energy operator for variable mass systems 105

M. Vubangsi, M. Tchoffo and L. C. Fai

Published online: 02 June 2014

DOI: 10.1140/epjp/i2014-14105-4

Exact analytical solution to the Poisson-Boltzmann equation for semiconductor devices 104

Elyas Shivanian, Saeid Abbasbandy and Mohammed S. Alhuthali

Published online: 02 June 2014

DOI: 10.1140/epjp/i2014-14104-5

EPJ

The European Physical Journal Plus

Volume 129 / No 6 (June 2014)

Focus Point on Pattern Recognition Tools for Proteomics

Annotation and retrieval in protein interaction databases 135

On the integration of protein-protein interaction networks with gene expression and 3D structural data: What can be gained? 134

Structural representation of data structures 133

Predicting protein-ligand and protein-peptide interfaces 132

Motifs and structural blocks retrieval by GHT 131

Pattern recognition tools for proteomics 130

Focus Point on Quantum information and complexity

Two notes on Grover’s search: Programming and discriminating 128

Focus Point on Quantum Spintronics and Related Phenomena

Spin-dependent recombination and single charge dynamics in silicon nanostructrures 121

Hot electron spin diffusion in n-type GaAs 118

Erratum to: Application of USDA and SDBA Hamiltonians in calculating the excited states of odd-A magnesium isotopes 140

Superstring symmetries and space-time dimensionality 139

A theoretical study of energy spectra and two-neutron separation energies of 106–122Cd isotopes in the transitional region of IBM 138

Conformal invariant teleparallel cosmology 137

Envelope periodic solutions for a discrete network with the Jacobi elliptic functions and the alternative (G′/G)-expansion method including the generalized Riccati equation 136

Quantum dynamics of a kicked system with position-dependent effective mass 129

Unusual ferromagnetism in Ising and Potts model on semi-directed Barabási-Albert networks 127

A note on the Sagnac effect and current terrestrial experiments 126

Application of USDA and SDBA Hamiltonians in calculating the excited states of odd-A magnesium isotopes 125

GUE-type energy level statistics for spherical odd-mass nuclei 124

Peristaltic impulsion of MHD biviscosity fluid in a lopsided channel: Closed-form solution 123

Cosmological models with strange quark matter attached to string cloud in GR and Brans-Dicke theory of gravitation 122

A note on the exact temperatures of free two-dimensional and circular jets 120

Interaction between modified Chaplygin gas and ghost dark energy in the presence of extra dimensions 119

The effect of nitrogen ion implantation on the corrosion resistance and microstructure of tantalum-coated stainless steel 117

Determination of the complex refractive index of cell cultures by reflectance spectrometry 116

Classical light sources with tunable temporal coherence and tailored photon number distributions 115

Equivalence between free quantum particles and those in harmonic potentials and its application to instantaneous changes 114

Generalized Jaynes-Cummings model in master function and supersymmetric representations 113

Nucleon elastic scattering in quark-diquark representation with springy Pomeron 112

On the origins and the historical roots of the Higgs boson research from a bibliometric perspective 111

Quantum superintegrable systems with arbitrary spin: Exact solution with deformed oscillator formalism 110

On exact minimization of Higgs potentials 109

A confining model for charmonium and new gauge-invariant field equations 108

Nonlinear peristaltic flow of a Carreau fluid in the presence of Hall current and convective effect 107

Stability and bifurcation of the Tsodyks-Markram model about short-term synaptic plasticity with time delay 106

New kinetic energy operator for variable mass systems 105

Exact analytical solution to the Poisson-Boltzmann equation for semiconductor devices 104

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Conference announcements

A theoretical study of energy spectra and two-neutron separation energies of ^106–122Cd isotopes in the transitional region of IBM 138